Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933879.1_cds_XP_016480092.1_71567
CDS Infomation

[gene=LOC107801300] [db_xref=GeneID:107801300] [protein=serine/threonine-protein kinase RIO1-like] [protein_id=XP_016480092.1] [location=join(7569..7898,8987..9115,9863..9955,10052..10131,10280..10393,10979..11052,12256..12332,12776..12859,12936..13028,13202..13309,13423..13494,13872..14306)] [gbkey=CDS]
Sequence

ATGGCCGAACCTGCTGACAAATTAGAGAAACCCCAAAATGCTGAAAACGAAAAAGAAGCA
GCAGTAGTAGATGAAGAATTAGAAGAGGAAGAAGAAGAAGAAGACGAAGAGGGAGAATTA
TCATGGTCTTCAGACTCAGAAATTGGTGAAGCTTTAGATTATTTGGACACAAAAGATGAT
TCTGAATCCATAAATGGTGCTTTTAGTCTCCAAACTAGACGCCCAAATGCTCATGGAGGA
CTTCATTCTCGGCCCAATTCTTCTGCTTTACAACCTCTTTCTAATCGTACCCAGAAATTT
TCTAATCATATTAGAGCTTCACCATTAGAGGAATGGGAAGGGAGGATCAAAGTTGGTATG
TCAAACTCTGTGACTACGGCAATTCGTGGAAGTGTTCGGGATATGGCTATTGGTAAAACT
AAAACAACGGAGAAGGCAGACCGTGCCACTGTTGAACAGGCAATTGATCCAAGAACAAGA
ATGGTTTTGTTTAAAATGCTGAACCGCGGTGTCTTTCATGATATCAATGGCTGTATTTCA
ACTGGGAAAGAGGCCAATGTTTATCATGCAACAAAAGCTGATGGTCAGGAACTGGCAATC
AAAGTATACAAAACTTCAGTCCTTGTATTCAAGGATAGAGATCGCTATGTACAGGGTGAC
TATCGCTTCAGATATGGATACTGCAAGCACAATCCTCGGAAAATGGTTAAAACATGGGCT
GAGAAAGAAATGAGAAATCTAATGAGGCTGAGGGCAGCTGGAATCAGGTGTCCAGCTCCA
CTTCTGTTGAGGCTTCATGTTCTTGTTATGGAATTCATAGGGAAAGGAGGCTGGGCTGCA
CCTCGACTAAAGGATGCTGCTTTATCTCTTGACAAGTTACGTGAATGTTATGTGGAGATC
ATTATGGCAATGCGAACTCTATATCAGAAGTGCAAGCTAGTGCATGGTGACTTGAGCGAG
TATAATATCCTATATTACGAGGGTCACTTGTATGTTATTGATGTTTCACAATCAGTTGAT
CTTGATCATCCTCATGCACTTGATTTCCTCCGAGAGGATTGTGTCCATGTTTCTGACTTT
TTTAAAAAACATGGTGTGGCCGTGATGACAATTCGGGAGTTGTTTGATTTTATAGTTGAT
CCTACTATTGATGATGATTCAGTGGATAGCTATTTGGAAAAGGTTCAAGAAAAAATTATG
GCTAGAGGTGAGATGACTGCAGAAGAAGAAATCGCTGACTCTGTATTTATTCAGTCATTT
ATCCCTAAGACTCTTGATCATGTGAAAGACGCTGAAGCAGATGTTCAACGCATTATTAGT
GGTGAGGACACAGGAGACATGTACTACAAGACTATTACAGGTCTGAAGCAGGCTCTCTCA
GGGACAAACCCTTCGGCAGAAAATCAGCAGCACGAACAAAATGGTGAACGGGGACCAGAG
GCTGCAGCTGAAATCGACAAAGAATCTGATGGTGAATTAGAGACCGAGTCAGATGATGAC
GATGAAAGTGATTCTAGCGAAGGCTTTTCATCCGATGGTGAAAAACAAACAGCTGCTGAA
AAGAAAACAGCTAGAAAAGAGAATAAGAAGAAAGTTAAAGAAGAGAAAAGGGAAGCACGA
AAACATAAAGTACCAAAAGCTGTGAAAAAGAAGAAGAAAAAGTTGGCCAAGGCCAAGAAG
TATAGGTAA

Peptide Sequence

PEP ID

XP_016480092.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase RIO1-like [Nicotiana tabacum]
Sequence

MAEPADKLEKPQNAENEKEAAVVDEELEEEEEEEDEEGELSWSSDSEIGEALDYLDTKDD
SESINGAFSLQTRRPNAHGGLHSRPNSSALQPLSNRTQKFSNHIRASPLEEWEGRIKVGM
SNSVTTAIRGSVRDMAIGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCIS
TGKEANVYHATKADGQELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWA
EKEMRNLMRLRAAGIRCPAPLLLRLHVLVMEFIGKGGWAAPRLKDAALSLDKLRECYVEI
IMAMRTLYQKCKLVHGDLSEYNILYYEGHLYVIDVSQSVDLDHPHALDFLREDCVHVSDF
FKKHGVAVMTIRELFDFIVDPTIDDDSVDSYLEKVQEKIMARGEMTAEEEIADSVFIQSF
IPKTLDHVKDAEADVQRIISGEDTGDMYYKTITGLKQALSGTNPSAENQQHEQNGERGPE
AAAEIDKESDGELETESDDDDESDSSEGFSSDGEKQTAAEKKTARKENKKKVKEEKREAR
KHKVPKAVKKKKKKLAKAKKYR

Transcript Sequence

Gene sequence data has not been registered.